me-PCR: a refined ultrafast algorithm for identifying sequence-defined genomic elements.
Kevin MurphyTowfique RajR. Scott WintersPeter S. WhitePublished in: Bioinform. (2004)
Keyphrases
- k means
- experimental evaluation
- dynamic programming
- learning algorithm
- computational complexity
- search space
- high accuracy
- worst case
- improved algorithm
- np hard
- recognition algorithm
- optimal solution
- optimization algorithm
- expectation maximization
- forward backward
- matching algorithm
- tree structure
- clustering method
- theoretical analysis
- computationally efficient
- neural network
- objective function
- preprocessing
- cost function
- multi objective
- significant improvement
- input data
- linear programming
- segmentation algorithm
- simulated annealing
- detection algorithm
- computational cost
- times faster