Parallel pairwise statistical significance estimation of local sequence alignment using Message Passing Interface library.
Ankit AgrawalSanchit MisraDaniel HonboAlok N. ChoudharyPublished in: Concurr. Comput. Pract. Exp. (2011)
Keyphrases
- statistical significance
- sequence alignment
- pairwise
- message passing interface
- parallel implementation
- binding sites
- parallel algorithm
- message passing
- massively parallel
- high performance computing
- shared memory
- parallel architectures
- parallel programming
- belief propagation
- markov random field
- parallel execution
- parallel computing
- statistically significant
- psi blast
- similarity measure
- processing units
- distributed memory
- high end
- parallel machines
- parallel computation
- computing resources
- parallel processing