CONTRAlign: Discriminative Training for Protein Sequence Alignment.
Chuong B. DoSamuel S. GrossSerafim BatzoglouPublished in: RECOMB (2006)
Keyphrases
- sequence alignment
- discriminative training
- hidden markov models
- maximum likelihood
- probabilistic interpretation
- pairwise
- protein sequences
- amino acids
- posterior probability
- dynamic programming
- automatic speech recognition
- co training
- support vector machine
- multiple alignment
- protein structure
- multiple sequence alignment
- binding sites
- protein structure prediction
- semi supervised learning
- bayesian networks
- computational biology
- feature vectors
- comparative genomics