permGPU: Using graphics processing units in RNA microarray association studies.
Ivo D. ShterevSin-Ho JungStephen L. GeorgeKouros OwzarPublished in: BMC Bioinform. (2010)
Keyphrases
- genome wide
- microarray
- high throughput
- graphics processing units
- association studies
- general purpose
- gene expression
- gene expression data
- parallel processing
- microarray data
- parallel implementation
- systems biology
- biological data
- real time
- parallel computing
- computing systems
- floating point
- human genome
- experimental conditions
- high dimensionality
- gene ontology
- gene selection
- single nucleotide polymorphisms
- transcription factors
- gene expression profiles
- massively parallel
- molecular biology
- genomic data
- biological networks
- protein protein interactions
- microarray datasets
- wireless sensor networks
- biological processes
- data processing
- energy consumption
- data acquisition