Classification of Non-Coding RNA Using Graph Representations of Secondary Structure.
Yan KarklinRichard F. MerazStephen R. HolbrookPublished in: Pacific Symposium on Biocomputing (2005)
Keyphrases
- secondary structure
- rna secondary structure prediction
- protein sequences
- graph representations
- computational methods
- structural features
- protein structure
- feature selection
- rna sequences
- rna secondary structures
- amino acid sequences
- feature space
- amino acids
- classification accuracy
- string kernels
- support vector
- machine learning
- feature vectors
- supervised learning
- machine learning methods
- feature extraction
- decision trees
- model selection
- computational biology
- feature set
- training set
- training data
- similarity measure
- social networks