Inference Algorithms for Pattern-Based CRFs on Sequence Data.

Vladimir Kolmogorov Rustem Takhanov

Published in: Algorithmica (2016)

Keyphrases

sequence data
biological sequences
learning algorithm
hidden markov models
pairwise
higher order
bayesian networks
information extraction
markov random field
conditional random fields
probabilistic inference
binding sites
structured prediction
loopy belief propagation
sequence analysis
sequence classification