Implementing protein seed-based comparison algorithm on the SGI RASC-100 platform.
Van Hoa NguyenAlexandre CornuDominique LavenierPublished in: IPDPS (2009)
Keyphrases
- learning algorithm
- experimental evaluation
- preprocessing
- high accuracy
- linear programming
- k means
- optimization algorithm
- dynamic programming
- theoretical analysis
- computational complexity
- detection algorithm
- np hard
- real time
- improved algorithm
- optimal solution
- objective function
- times faster
- computational cost
- simulated annealing
- worst case
- expectation maximization
- probabilistic model
- significant improvement
- search space
- matching algorithm
- image sequences
- social networks
- seeded region growing