Evolutionary rates at codon sites may be used to align sequences and infer protein domain function.
Pierre M. DurandScott HazelhurstTheresa L. CoetzerPublished in: BMC Bioinform. (2010)
Keyphrases
- amino acids
- multiple sequence alignment
- sequence alignment
- protein sequences
- sequence analysis
- hidden markov models
- nucleotide sequences
- dna sequences
- protein families
- protein structure prediction
- sequence data
- multiple sequence alignments
- website
- domain independent
- genetic algorithm
- genomic sequences
- sequence databases
- phylogenetic trees
- protein structure
- evolutionary algorithm
- evolutionary process
- biological sequences
- neural network
- genome sequences
- sequence similarity
- mass spectra
- structural motifs
- evolutionary computation
- protein coding regions