Generalized Gene Adjacencies, Graph Bandwidth, and Clusters in Yeast Evolution.
Qian ZhuZaky AdamVicky ChoiDavid SankoffPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2009)
Keyphrases
- gene expression data
- graph clustering
- regulatory networks
- gene clusters
- biologically significant
- microarray
- protein protein interaction networks
- high throughput
- protein interaction
- gene expression
- protein function prediction
- microarray data
- horizontal gene transfer
- gene ontology
- biological networks
- saccharomyces cerevisiae
- bipartite graph
- clustering algorithm
- gene regulatory networks
- random walk
- graph structure
- protein interaction networks
- cluster analysis
- protein complexes
- graph mining
- proximity graph
- weighted graph
- gene expression patterns
- transcription factors
- budding yeast
- biological processes
- gene expression profiles
- gene expression analysis
- cell cycle
- biological data
- gene selection
- normalized cut