A structural alignment kernel for protein structures.
Jian QiuMartial HueAsa Ben-HurJean-Philippe VertWilliam Stafford NoblePublished in: Bioinform. (2007)
Keyphrases
- protein structure
- protein structure alignment
- protein backbone
- protein structural
- experimentally determined
- protein sequences
- molecular biology
- sequence alignment
- kernel function
- amino acids
- secondary structure
- nuclear magnetic resonance
- protein structure prediction
- protein tertiary structure
- kernel methods
- protein structure and function
- contact map
- psi blast
- support vector
- protein function
- amino acid sequences
- protein classification
- structural information
- maximum clique
- backtracking algorithm
- contact maps
- computational approaches
- protein folding
- structural features
- feature space