A Structure-Based Approach for Prediction of Protein Binding Sites in Gene-Upstream Regions.
Yael Mandel-GutfreundA. BaronHanah MargalitPublished in: Pacific Symposium on Biocomputing (2001)
Keyphrases
- transcription factor binding sites
- binding sites
- protein interaction
- dna binding
- dna sequences
- gene expression
- gene prediction
- coding regions
- sequence alignment
- contact map
- regulatory elements
- sequence data
- drosophila melanogaster
- regulatory networks
- transcription factors
- cis regulatory
- microarray
- protein protein
- statistical significance
- motif discovery
- protein structure prediction
- protein families
- genome wide
- gene ontology
- biological sequences
- gene expression levels
- protein structure
- protein interaction networks
- biological knowledge
- protein protein interactions
- biological data
- protein sequences
- network structure
- pairwise