DSA: Scalable Distributed Sequence Alignment System Using SIMD Instructions.
Bo XuChanglong LiHang ZhuangJiali WangQingfeng WangJinhong ZhouXuehai ZhouPublished in: CoRR (2017)
Keyphrases
- sequence alignment
- scalable distributed
- pairwise
- massively parallel
- parallel algorithm
- dynamic programming
- parallel processing
- protein sequences
- gpu accelerated
- binding sites
- file system
- amino acids
- parallel implementation
- multiple sequence alignment
- multiple alignment
- protein structure
- data sets
- parallel architectures
- comparative genomics
- processor array