A Topological Characterization of DNA Sequences Based on Chaos Geometry and Persistent Homology.
Dong Quan Ngoc NguyenPhuong Dong Tan LeLin XingLizhen LinPublished in: CSCI (2022)
Keyphrases
- sequence patterns
- persistent homology
- dna sequences
- morse theory
- topological features
- dna sequencing
- computational geometry
- human genome
- tandem repeats
- dna computing
- problems in computational biology
- binding sites
- critical points
- motif discovery
- gene structure prediction
- databases
- computer vision
- coding regions
- biological sequences
- link prediction
- supervised learning
- homo sapiens