Inferring Binding Energies from Selected Binding Sites.
Yue ZhaoDavid GranasGary D. StormoPublished in: PLoS Comput. Biol. (2009)
Keyphrases
- binding sites
- dna binding
- transcription factor binding sites
- transcription factors
- dna sequences
- gene expression
- sequence data
- motif discovery
- regulatory elements
- cis regulatory
- statistical significance
- genome wide
- graph cuts
- protein interaction
- biological sequences
- transcriptional regulation
- data mining
- coding regions
- gene regulation
- markov random field
- similarity measure
- information retrieval