Parallelizing Optimal Multiple Sequence Alignment by Dynamic Programming.

Manal Helal Hossam ElGindy Lenore R. Mullin Bruno A. Gaëta

Published in: ISPA (2008)

Keyphrases

dynamic programming
multiple sequence alignment
sequence alignment
state space
protein sequences
secondary structure
neural network
databases
optimal solution
lower bound
high dimensional
multiple alignment
biological sequences
memory efficient
optimal policy
simulated annealing
genetic algorithm