GapMis-OMP: Pairwise Short-Read Alignment on Multi-core Architectures.

Tomás Flouri Costas S. Iliopoulos Kunsoo Park Solon P. Pissis

Published in: AIAI (2) (2012)

Keyphrases

pairwise
global alignment
sequence alignment
multi class
markov random field
reference genome
higher order
similarity measure
pairwise interactions
image alignment
data sets
multiple sequence alignments
point sets
dynamic time warping
graph matching
spectral clustering
belief propagation
database