Importance Sampling of Word Patterns in DNA and Protein Sequences.
Hock Peng ChanNancy Ruonan ZhangLouis H. Y. ChenPublished in: J. Comput. Biol. (2010)
Keyphrases
- protein sequences
- importance sampling
- sequence databases
- nucleotide sequences
- biological sequences
- sequence analysis
- monte carlo
- computational biology
- markov chain
- genome sequences
- amino acids
- protein structure
- particle filter
- sequential patterns
- kalman filter
- co occurrence
- similarity search
- secondary structure
- amino acid sequences
- dna sequences
- approximate inference
- particle filtering
- sequence alignment
- biological data
- model selection
- sequential pattern mining
- molecular biology
- markov chain monte carlo
- feature selection
- state space
- pairwise