UNRES-Dock - protein-protein and peptide-protein docking by coarse-grained replica-exchange MD simulations.
Pawel KrupaAgnieszka S. KarczynskaMagdalena A. MozolewskaAdam LiwoCezary CzaplewskiPublished in: Bioinform. (2021)
Keyphrases
- protein protein
- coarse grained
- protein sequences
- amino acids
- hiv protease
- protein protein interactions
- protein function
- mass spectrometry
- computational biology
- protein structure
- protein structure prediction
- fine grained
- amino acid sequences
- secondary structure
- high throughput
- computational methods
- sequence analysis
- protein folding
- drug design
- predicting protein
- computational approaches
- network analysis
- biological data
- high precision
- protein interaction
- interaction networks
- binding sites
- genomic data
- computational tools
- systems biology
- information retrieval
- network topology
- peer to peer
- text mining
- natural language processing
- similarity measure