SCOUT: A new algorithm for the inference of pseudo-time trajectory using single-cell data.
Jiangyong WeiTianshou ZhouXinan ZhangTianhai TianPublished in: Comput. Biol. Chem. (2019)
Keyphrases
- learning algorithm
- data analysis
- data reduction
- data collection
- dynamic programming
- cost function
- data sets
- input data
- preprocessing
- search space
- noisy data
- original data
- objective function
- detection algorithm
- incomplete data
- spectral clustering
- database
- simulated annealing
- probabilistic model
- configuration space
- computational complexity
- k means
- worst case
- similarity measure
- optimization algorithm
- inference process
- high dimensional data
- computational cost
- information loss
- matching algorithm
- data distribution
- dimensional data
- synthetic datasets
- inference mechanism
- missing data
- synthetic data
- expectation maximization
- neural network
- data sources
- np hard
- lower bound