MathFeature: feature extraction package for DNA, RNA and protein sequences based on mathematical descriptors.
Robson BonidiaDouglas Silva DominguesDanilo Sipoli SanchesAndré C. P. L. F. de CarvalhoPublished in: Briefings Bioinform. (2022)
Keyphrases
- protein sequences
- nucleotide sequences
- feature extraction
- rna sequences
- genome sequences
- sequence analysis
- secondary structure
- feature vectors
- computational biology
- biological sequences
- structural motifs
- protein structure
- multiple alignment
- amino acids
- sequence databases
- protein classification
- amino acid sequences
- image classification
- face recognition
- multiple sequence alignment
- protein structure and function
- protein secondary structure
- protein structure prediction
- protein function
- feature selection
- sequence alignment
- dna sequences
- keypoints
- support vector machine svm
- feature space
- molecular biology
- sequence data
- feature set
- protein structural