Combining pairwise sequence similarity and support vector machines for remote protein homology detection.
Li LiaoWilliam Stafford NoblePublished in: RECOMB (2002)
Keyphrases
- protein homology
- sequence similarity
- protein structure prediction
- pairwise
- support vector
- learning machines
- loss function
- large margin classifiers
- computational biology
- genome scale
- protein structure
- computational methods
- similarity measure
- amino acids
- multi class
- support vector machine
- feature selection
- graph theory
- secondary structure
- protein sequences
- markov random field
- data mining
- coarse grained
- protein folding
- protein function
- artificial intelligence