Combinatorial RNA Design: Designability and Structure-Approximating Algorithm.
Jozef HalesJán ManuchYann PontyLadislav StachoPublished in: CPM (2015)
Keyphrases
- computational complexity
- times faster
- theoretical analysis
- tree structure
- high accuracy
- preprocessing
- dynamic programming
- detection algorithm
- worst case
- np hard
- graph structure
- improved algorithm
- genetic algorithm
- significant improvement
- experimental evaluation
- optimal solution
- case study
- learning algorithm
- optimization algorithm
- ant colony optimization
- design process
- rna secondary structure prediction
- clustering method
- expectation maximization
- particle swarm optimization
- input data
- linear programming
- multi objective
- evolutionary algorithm
- similarity measure