A scalable parallel algorithm for global sequence alignment with customizable scoring scheme.
Muhammad Umair SadiqMuhammad Murtaza YousafPublished in: Concurr. Comput. Pract. Exp. (2023)
Keyphrases
- parallel algorithm
- sequence alignment
- pairwise
- parallel computation
- parallel programming
- parallel version
- binary search trees
- smith waterman
- shared memory
- cluster of workstations
- dynamic programming
- binding sites
- search algorithm
- frequent itemsets
- amino acids
- medial axis transform
- multiple alignment
- phylogenetic analysis
- discovery of association rules
- processor array
- protein sequences