Accelerating gene regulatory networks inference through GPU/CUDA programming.
Fabrizio F. BorelliRaphael Y. de CamargoDavid Correa Martins Jr.Beatriz StranskyLuiz C. S. RozantePublished in: ICCABS (2012)
Keyphrases
- gene regulatory networks
- dynamic bayesian networks
- bayesian inference
- graphics processing units
- gpu implementation
- parallel implementation
- graphics processors
- compute unified device architecture
- gene regulatory
- reverse engineering
- gene expression data
- network model
- parallel computing
- gene networks
- regulatory networks
- general purpose
- boolean networks
- biological data
- bayesian networks
- real time
- probabilistic inference
- object oriented
- prior information
- structure learning
- microarray
- gene expression
- belief networks
- probabilistic model
- particle filtering
- nearest neighbor
- shared memory