Graphical Models of Residue Coupling in Protein Families.
John ThomasNaren RamakrishnanChris Bailey-KelloggPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2008)
Keyphrases
- graphical models
- protein families
- amino acids
- protein sequences
- belief propagation
- probabilistic model
- probabilistic inference
- random variables
- approximate inference
- probabilistic graphical models
- bayesian networks
- protein structure
- protein function
- conditional random fields
- amino acid sequences
- map inference
- structure learning
- protein structure prediction
- dna sequences
- markov networks
- binding sites
- message passing
- conditional independence
- secondary structure
- computational biology