GPU Accelerated Computation of the Longest Common Subsequence.

Katsuya Kawanami Noriyuki Fujimoto

Published in: Facing the Multicore-Challenge (2011)

Keyphrases

gpu accelerated
longest common subsequence
finite element
real time
dynamic time warping
biological sequences
neural network
pairwise
least squares
high dimensional data
approximation algorithms
sequence alignment
subsequence matching