Optimal Spaced Seeds for Hidden Markov Models, with Application to Homologous Coding Regions.

Brona Brejová Daniel G. Brown Tomás Vinar

Published in: CPM (2003)

Keyphrases

hidden markov models
markov models
speech recognition
conditional random fields
dynamic programming
sequential data
data mining
comparative analysis
sequence classification
continuous hidden markov models
clustering algorithm
natural language processing
closed form