Predikin and PredikinDB: a computational framework for the prediction of protein kinase peptide specificity and an associated database of phosphorylation sites.
Neil F. W. SaundersRoss I. BrinkworthThomas HuberBruce E. KempBostjan KobePublished in: BMC Bioinform. (2008)
Keyphrases
- computational framework
- experimentally determined
- amino acids
- protein sequences
- database
- protein classification
- remote homology detection
- sequence alignment
- protein structure
- computational model
- contact map
- protein function
- secondary structure
- databases
- tandem mass spectra
- mass spectrometry
- amino acid residues
- protein protein interactions
- prediction accuracy
- active vision
- website
- protein structure prediction
- tensor voting
- contact maps
- protein protein
- relational databases
- protein secondary structure
- amino acid sequences
- structural motifs
- protein families
- subcellular localization
- protein folding
- sequence databases
- database management systems
- physicochemical properties
- computational biology
- database systems