A Pairwise Alignment Algorithm Which Favors Clusters of Blocks.
Elodie NédélecThomas MoncionElisabeth GassiatBruno BossardGuillemette Duchateau-NguyenAlain DeniseMichel TermierPublished in: J. Comput. Biol. (2005)
Keyphrases
- pairwise
- similarity measure
- optimal solution
- data clustering
- k means
- np hard
- optimization algorithm
- expectation maximization
- learning algorithm
- detection algorithm
- worst case
- hierarchical clustering
- search space
- sequence alignment
- dissimilarity matrix
- fuzzy c means
- cluster centers
- particle swarm optimization
- input data
- multi class
- preprocessing
- objective function
- clustering algorithm
- segmentation algorithm
- cost function
- computational complexity
- graph clustering
- initial set
- rows and columns
- density based clustering algorithm