Algorithm for backrub motions in protein design.
Ivelin GeorgievDaniel A. KeedyJane S. RichardsonDavid C. RichardsonBruce Randall DonaldPublished in: ISMB (2008)
Keyphrases
- experimental evaluation
- optimal solution
- high accuracy
- learning algorithm
- theoretical analysis
- recognition algorithm
- times faster
- optimization algorithm
- computational complexity
- search space
- multi objective
- case study
- matching algorithm
- dynamic programming
- preprocessing
- computational cost
- simulated annealing
- particle swarm optimization
- genetic algorithm
- convergence rate
- similarity measure
- segmentation algorithm
- objective function
- worst case
- np hard
- cost function
- k means
- evolutionary algorithm