Protein Fold Recognition Using Segmentation Conditional Random Fields (SCRFs).
Yan LiuJaime G. CarbonellPeter WeigeleVanathi GopalakrishnanPublished in: J. Comput. Biol. (2006)
Keyphrases
- conditional random fields
- image labeling
- long range
- semantic segmentation
- segmentation method
- crf model
- protein fold recognition
- hidden markov models
- graphical models
- higher order
- probabilistic model
- random fields
- sequence labeling
- markov random field
- web page prediction
- image segmentation
- information extraction
- semi markov
- named entity recognition
- generative model
- segmentation algorithm
- maximum entropy
- parameter learning
- structured prediction
- level set
- pairwise
- undirected graphical models
- loopy belief propagation
- protein structure
- dependency parsing
- markov networks
- approximate inference
- superpixels
- prediction accuracy
- co occurrence
- text mining
- multiscale