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AStarix: Fast and Optimal Sequence-to-Graph Alignment.
Pesho Ivanov
Benjamin Bichsel
Harun Mustafa
André Kahles
Gunnar Rätsch
Martin T. Vechev
Published in:
RECOMB (2020)
Keyphrases
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sequence alignment
dynamic programming
optimal solution
random walk
multiple sequence alignment
bayesian networks
worst case
genetic algorithm
image registration
directed graph
bipartite graph
graph theory
directed acyclic graph
graph model
adjacency matrix