Fast discovery and visualization of conserved regions in DNA sequences using quasi-alignment.
Anurag NagarMichael HahslerPublished in: BMC Bioinform. (2013)
Keyphrases
- dna sequences
- rna sequences
- transcription factor binding sites
- motif discovery
- protein coding regions
- coding regions
- binding sites
- problems in computational biology
- tandem repeats
- nucleotide sequences
- human genome
- sequence alignment
- dna sequencing
- data analysis
- dna computing
- rna secondary structures
- secondary structure
- biological sequences
- regulatory elements
- knowledge discovery
- sequence patterns