Identifying gene and protein mentions in text using conditional random fields.
Ryan T. McDonaldFernando PereiraPublished in: BMC Bioinform. (2005)
Keyphrases
- sequence alignment
- textual content
- named entity disambiguation
- cellular processes
- gene expression
- named entity recognition
- interaction networks
- regulatory networks
- microarray
- named entities
- text documents
- protein sequences
- information retrieval
- amino acids
- protein protein interaction networks
- biological entities
- homo sapiens
- gene prediction
- protein interaction
- protein structure
- saccharomyces cerevisiae
- dna binding
- nucleotide sequences
- text mining
- relation extraction
- gene regulatory networks