Finding the longest common subsequence for multiple biological sequences by ant colony optimization.
Shyong Jian ShyuChun-Yuan TsaiPublished in: Comput. Oper. Res. (2009)
Keyphrases
- ant colony optimization
- biological sequences
- longest common subsequence
- metaheuristic
- sequence data
- protein sequences
- molecular biology
- particle swarm optimization
- dynamic time warping
- dna sequences
- approximation algorithms
- edit distance
- genetic algorithm
- computational biology
- biological data
- finite automata
- similarity function
- combinatorial optimization
- similarity measure
- machine learning methods
- self organizing maps
- evolutionary algorithm
- search space
- binding sites
- search algorithm