Improved protein residue-residue contacts prediction using learning-to-rank.
Xiaoyang JingQiwen DongPublished in: BIBM (2016)
Keyphrases
- contact map
- learning to rank
- contact maps
- protein structure prediction
- amino acids
- protein structure
- protein chains
- ranking functions
- information retrieval
- document retrieval
- loss function
- evaluation measures
- ranking svm
- amino acid sequences
- protein sequences
- collaborative filtering
- prediction accuracy
- directly optimize
- learning to rank algorithms
- direct optimization
- retrieval systems
- query dependent
- protein function
- ranking models
- optimization methods