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GenStore: a high-performance in-storage processing system for genome sequence analysis.

Nika Mansouri-GhiasiJisung ParkHarun MustafaJeremie S. KimAtaberk OlgunArvid GollwitzerDamla Senol CaliCan FirtinaHaiyu MaoNour Almadhoun AlserrRachata AusavarungnirunNandita VijaykumarMohammed AlserOnur Mutlu
Published in: ASPLOS (2022)
Keyphrases
  • sequence analysis
  • sequence data
  • computational biology
  • protein sequences
  • splice site
  • suffix array
  • file system
  • motif discovery
  • information retrieval
  • text retrieval
  • suffix tree