Predicting protein contact map using evolutionary and physical constraints by integer programming (extended version).
Zhiyong WangJinbo XuPublished in: CoRR (2013)
Keyphrases
- integer programming
- physical constraints
- predicting protein
- contact map
- protein structure
- secondary structure
- constraint programming
- np hard
- linear programming
- protein function
- protein protein interactions
- protein interaction
- protein structure alignment
- computational methods
- amino acid sequences
- protein structure prediction
- fine grained
- machine learning