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Exact Pattern Matching for RNA Secondary Structures.
Ying Yu
Lusheng Wang
Xiaotie Deng
Published in:
APBC (2004)
Keyphrases
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pattern matching
rna secondary structures
secondary structure
regular expressions
string matching
pattern matching algorithm
edit distance
rna sequences
stochastic context free grammars
graph matching
similarity measure
pairwise
hidden markov models
suffix tree