A Comparative Study on String Matching Algorithm of Biological Sequences.
P. PandiselvamT. MarimuthuR. LawrancePublished in: CoRR (2014)
Keyphrases
- matching algorithm
- biological sequences
- regular expressions
- long strings
- longest common subsequence
- smith waterman
- sequence data
- protein sequences
- matching process
- molecular biology
- biological data
- dna sequences
- image matching
- data structure
- computational biology
- graph matching
- edit distance
- binding sites
- string matching
- pattern matching
- shape matching
- self organizing maps
- high throughput
- suffix tree
- knowledge discovery