FastMotif: spectral sequence motif discovery.
Nicolò ColomboNikos VlassisPublished in: Bioinform. (2015)
Keyphrases
- motif discovery
- biological sequences
- sequence analysis
- dna sequences
- recurring patterns
- motif finding
- motif discovery algorithm
- sequence databases
- computational biology
- sequence data
- data mining tasks
- pattern discovery
- binding sites
- transcription factor binding sites
- protein sequences
- molecular biology
- data mining algorithms
- optimal solution
- multi objective optimization
- pattern mining
- co occurrence