A New Approach for De Bruijn Graph Construction in De Novo Genome Assembling.
Elvismary Molina de ArmasLiester Cruz CastroMaristela HolandaSérgio LifschitzPublished in: BIBM (2019)
Keyphrases
- graph construction
- human genome
- genomic sequences
- motif discovery
- dna sequences
- k nearest neighbor
- knn
- semi supervised learning
- graph based semi supervised learning
- sequence data
- semi supervised
- genome wide
- dimensionality reduction
- spectral clustering
- graph structure
- semi supervised classification
- multi label
- binding sites
- nearest neighbor
- label propagation
- subspace learning
- neural network
- unlabeled data
- high throughput
- clustering method