Integrative Biomarker Discovery for Breast Cancer Metastasis from Gene Expression and Protein Interaction Data Using Error-tolerant Pattern Mining.
Rohit GuptaSmita AgrawalNavneet RaoZe TianRui KuangVipin KumarPublished in: BICoB (2010)
Keyphrases
- breast cancer
- pattern mining
- gene expression
- protein interaction
- biological processes
- microarray
- genomic data
- protein complexes
- gene expression data
- high throughput
- gene ontology
- protein protein interactions
- biological networks
- microarray data
- data mining
- graph mining
- protein interaction networks
- logistic regression
- interesting patterns
- gene expression profiles
- pattern discovery
- sequential patterns
- frequent patterns
- gene expression analysis
- data mining techniques
- itemsets
- binding sites
- high dimensionality
- gene networks
- gene selection
- experimental conditions
- biological data
- functional modules
- data sets
- transcription factors
- sequence data
- protein protein interaction networks