Exploiting structural and topological information to improve prediction of RNA-protein binding sites.
Stefan MaetschkeZheng YuanPublished in: BMC Bioinform. (2009)
Keyphrases
- binding sites
- dna binding
- protein interaction
- topological information
- structural information
- genome wide
- protein protein
- drosophila melanogaster
- transcription factors
- sequence alignment
- regulatory elements
- cis regulatory
- genome sequences
- sequence data
- transcription factor binding sites
- predicting protein
- dna sequences
- motif discovery
- gene expression
- regulatory networks
- protein structure
- spatial information
- protein protein interactions
- three dimensional