YGMD: a repository for yeast cooperative transcription factor sets and their target gene modules.
Wei-Sheng WuPin-Han ChenTsung-Te ChenYan Yuan TsengPublished in: Database J. Biol. Databases Curation (2017)
Keyphrases
- transcription factors
- gene expression
- regulatory networks
- microarray
- dna binding
- saccharomyces cerevisiae
- gene regulation
- binding sites
- gene expression data
- biological processes
- biomedical literature
- genome wide
- microarray data
- cell cycle
- functional modules
- high throughput
- dna sequences
- protein protein interactions
- transcriptional regulation
- transcription factor binding sites
- systems biology
- protein protein interaction networks
- gene regulatory networks
- component analysis
- computational biology
- biological data
- biological networks
- signaling pathways
- co occurrence
- protein interaction networks
- gene ontology
- gene selection
- gene sets
- motif discovery
- microarray datasets
- high dimensionality
- experimental conditions
- highly correlated
- gene expression levels
- protein interaction
- feature selection
- statistical significance
- regulatory elements
- natural language processing