APTE: identification of indirect read-out A-DNA promoter elements in genomes.
David C. WhitleyValeria RunfolaPeter CaryLiliya NazlamovaMatt GuilleGarry ScarlettPublished in: BMC Bioinform. (2014)
Keyphrases
- sequence analysis
- binding sites
- genomic sequences
- escherichia coli
- computational biology
- dna sequences
- sequenced genomes
- phylogenetic analysis
- sequence data
- comparative analysis
- regulatory elements
- human genome
- coding regions
- genome sequences
- neural network
- dna computing
- microarray
- data sets
- motif discovery
- automatic identification
- sequence alignment
- gene expression
- comparative genomics
- data structure
- nucleotide sequences