An Optimized Distance Function for Comparison of Protein Binding Sites.
Gábor IvánPublished in: BSB (2007)
Keyphrases
- distance function
- binding sites
- dna binding
- protein protein
- sequence alignment
- drosophila melanogaster
- gene expression
- transcription factor binding sites
- similarity search
- regulatory elements
- protein interaction
- nearest neighbor
- transcription factors
- knn
- dna sequences
- protein families
- sequence data
- protein sequences
- distance measure
- statistical significance
- biological sequences
- protein protein interactions
- data points
- influenza virus
- regulatory networks
- motif discovery
- genome wide
- computational methods
- microarray
- similarity measure
- neural network
- genome sequences
- predicting protein
- database systems
- data sets