iced: fast and memory efficient normalization of contact maps.

Nelle Varoquaux Nicolas Servant

Published in: J. Open Source Softw. (2019)

Keyphrases

memory efficient
contact maps
coarse grained
contact map
fine grained
protein structure
extensive set
external memory
multiple sequence alignment
iterative deepening
amino acids
amino acid sequences
data analysis
protein sequences
co occurrence
similarity measure
integral image
high level