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A post-decoding re-ranking algorithm for predicting interacting residues in proteins with hidden Markov models incorporating long-distance information.
Colin Kern
Li Liao
Published in:
Comput. Biol. Chem. (2016)
Keyphrases
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hidden markov models
long distance
ranking algorithm
viterbi algorithm
speech recognition
protein sequences
amino acids
markov models
pairwise
computer systems
user interaction
ranking functions
protein structure
sequence classification
stochastic context free grammars