RBPPred: predicting RNA-binding proteins from sequence using SVM.
Xiaoli ZhangShiyong LiuPublished in: Bioinform. (2017)
Keyphrases
- sequence analysis
- secondary structure
- sequence similarity
- support vector
- predicting protein
- protein sequences
- support vector machine svm
- rna sequences
- cis regulatory
- dna binding
- amino acid composition
- rna secondary structures
- genome wide
- structural motifs
- sequence databases
- multiple sequence alignment
- svm classifier
- computational methods
- hiv protease
- amino acid sequences
- multiple alignment
- rna molecules
- transcription factor binding sites
- string kernels
- computational biology
- support vector machine
- feature vectors
- feature selection
- machine learning
- location prediction
- protein structure
- protein function
- genomic sequences
- functional modules
- kernel methods
- high throughput
- multi class
- knn
- training set
- feature space